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An automatic method for CASP9 free modeling structure prediction assessmentCong, Q.; Kinch, L. N.; Pei, J.; Shi, S.; Grishin, V. N.; Li, W.; Grishin, N. V. · Bioinformatics · 2011
Using protein design for homology detection and active site searchesPei, J.; Dokholyan, N. V.; Shakhnovich, E. I.; Grishin, N. V. · Proceedings of the National Academy of Sciences · 2003
Defining and predicting structurally conserved regions in protein superfamiliesHuang, I. K.; Pei, J.; Grishin, N. V. · Bioinformatics · 2013
Analysis of CASP8 targets, predictions and assessment methodsShi, S.; Pei, J.; Sadreyev, R. I.; Kinch, L. N.; Majumdar, I.; Tong, J.; Cheng, H.; Kim, B.-H.; Grishin, N. V. · Database · 2009
PROMALS web server for accurate multiple protein sequence alignmentsPei, J.; Kim, B.-H.; Tang, M.; Grishin, N. V. · Nucleic Acids Research · 2007
PCMA: fast and accurate multiple sequence alignment based on profile consistencyPei, J.; Sadreyev, R.; Grishin, N. V. · Bioinformatics · 2003
AL2CO: calculation of positional conservation in a protein sequence alignmentPei, J.; Grishin, N. V. · Bioinformatics · 2001
Quantifying uniformity of mapped readsHower, V.; Starfield, R.; Roberts, A.; Pachter, L. · Bioinformatics · 2012
Guest Editors' IntroductionChen, Jianer; Măndoiu, Ion; Sunderraman, Raj; Wang, Jianxin; Zelikovsky, Alexander · BMC Bioinformatics · 2012
Computing the protein binding sitesGuo, Fei; Wang, Lusheng · BMC Bioinformatics · 2012
Biological event compositionKilicoglu, Halil; Bergler, Sabine · BMC Bioinformatics · 2012
Robust design of microbial strainsCostanza, J.; Carapezza, G.; Angione, C.; Lio, P.; Nicosia, G. · Bioinformatics · 2012
Identification of distant family relationshipsSkare, O.; Sheehan, N.; Egeland, T. · Bioinformatics · 2009
A microcomputer network for biochemistryPeterson, Julian A. · Bioinformatics · 1985
Advanced Complex Trait AnalysisGray, A.; Stewart, I.; Tenesa, A. · Bioinformatics · 2012